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AMOS Documenation
Getting Started
AMOS Implementation Details
Programmers Guide - A introduction to the C++ API and how to add code to the build system
AMOS API - Describes the AMOS C++ API
AMOS CVS API - Describes the current CVS version of AMOS C++ API
AMOS Specification - Specifications for all AMOS objects and message formats
AMOS Components
Converters - Everything you need to know to convert your reads or assemblies into or from AMOS format
Pipelines - Describes the different AMOS Pipelines
Utilities - General Utilities
AMOS Tools
AMOScmp - AMOS Comparative Assembler
Bambus - Hierarchical Scaffolder
Hawkeye - AMOS Assembly Viewer and Validation tool
minimus - Lightweight Sequence Assembler
amosvalidate - Assembly Forensics
Related Tools
Celera Assembler - Genome assembler developed to assemble the human genome and used to assemble mouse, rat, fruit fly, and mosquito genomes.
MUMmer - Ultra-fast alignment of large-scale DNA and protein sequences