AMOS specification documents


message_types.rtf

Describes expected fields for AMOS message types.  This document is a good starting point if you want to write your own parser for AMOS files.

 

message_grammar.rtf

Describes grammar requirements for AMOS messages.  Parsers for this file format are provided both in Perl (see AMOS::AmosLib) and C++ (the Message_t type in the API).   Note that this format is inspired from the format developed at Celera Genomics for Celera Assembler.  The AMOS parsers can be used to parse Celera files as well, however the specific data types are different between AMOS and Celera Assembler.

 

libAMOS_quickref.rtf

Quick reference guide to the libAMOS C++ library.  This document contains definitions of the main concepts needed in writing AMOS code and provides you with code examples for performing basic bank access operations.