| BREAKPOINT | AMOS::Feature_t | [static] |
| clear() | AMOS::Feature_t | [inline, virtual] |
| COVERAGE | AMOS::Feature_t | [static] |
| eid_m | AMOS::IBankable_t | [protected] |
| Feature_t() | AMOS::Feature_t | [inline] |
| Feature_t(const Feature_t &source) | AMOS::Feature_t | [inline] |
| FIX | AMOS::Feature_t | [static] |
| flags_m | AMOS::IBankable_t | [protected] |
| getComment() const | AMOS::Universal_t | [inline] |
| getEID() const | AMOS::IBankable_t | [inline] |
| getIID() const | AMOS::IBankable_t | [inline] |
| getNCode() const | AMOS::Feature_t | [inline, virtual] |
| getRange() const | AMOS::Feature_t | [inline] |
| getSource() const | AMOS::Feature_t | [inline] |
| getStatus() const | AMOS::Universal_t | [inline] |
| getType() const | AMOS::Feature_t | [inline] |
| IBankable_t() | AMOS::IBankable_t | [inline] |
| IBankable_t(const IBankable_t &source) | AMOS::IBankable_t | [inline] |
| iid_m | AMOS::IBankable_t | [protected] |
| IMessagable_t() | AMOS::IMessagable_t | [inline] |
| isFlagA() const | AMOS::IBankable_t | [inline] |
| isFlagB() const | AMOS::IBankable_t | [inline] |
| isModified() const | AMOS::IBankable_t | [inline] |
| isRemoved() const | AMOS::IBankable_t | [inline] |
| JOIN | AMOS::Feature_t | [static] |
| KMER | AMOS::Feature_t | [static] |
| MATEPAIR | AMOS::Feature_t | [static] |
| MISASSEMBLY | AMOS::Feature_t | [static] |
| NCODE | AMOS::Feature_t | [static] |
| NULL_FEATURE | AMOS::Feature_t | [static] |
| ORF | AMOS::Feature_t | [static] |
| POLYMORPHISM | AMOS::Feature_t | [static] |
| readMessage(const Message_t &msg) | AMOS::Feature_t | [virtual] |
| readRecord(std::istream &fix, std::istream &var) | AMOS::Feature_t | [protected, virtual] |
| readRecordFix(std::istream &fix) | AMOS::Feature_t | [protected, virtual] |
| REPEAT | AMOS::Feature_t | [static] |
| setComment(const std::string &comment) | AMOS::Universal_t | [inline] |
| setEID(const std::string &eid) | AMOS::IBankable_t | [inline] |
| setFlagA(bool flag) | AMOS::IBankable_t | [inline] |
| setFlagB(bool flag) | AMOS::IBankable_t | [inline] |
| setIID(ID_t iid) | AMOS::IBankable_t | [inline] |
| setRange(Range_t range) | AMOS::Feature_t | [inline] |
| setSource(std::pair< ID_t, NCode_t > source) | AMOS::Feature_t | [inline] |
| setStatus(Status_t status) | AMOS::Universal_t | [inline] |
| setType(FeatureType_t type) | AMOS::Feature_t | [inline] |
| UNITIG | AMOS::Feature_t | [static] |
| Universal_t() | AMOS::Universal_t | [inline] |
| Universal_t(const Universal_t &source) | AMOS::Universal_t | [inline] |
| writeMessage(Message_t &msg) const | AMOS::Feature_t | [virtual] |
| writeRecord(std::ostream &fix, std::ostream &var) const | AMOS::Feature_t | [protected, virtual] |
| ~Feature_t() | AMOS::Feature_t | [inline] |
| ~IBankable_t() | AMOS::IBankable_t | [inline, virtual] |
| ~IMessagable_t() | AMOS::IMessagable_t | [inline, virtual] |
| ~Universal_t() | AMOS::Universal_t | [inline, virtual] |
