Difference between revisions of "Figaro"

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== Overview ==
 
== Overview ==
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Figaro is a software tool for identifying and removing the vector from raw DNA sequence data without prior knowledge of the vector sequence.  By statistically modeling short oligonucleotide frequencies within a set of reads, Figaro is able to determine which DNA words are most likely associated with vector sequence.  For a description of Figaro's algorithms please see our paper.  You may download Figaro individually, or as part of the AMOS package at Sourceforge.       
 
Figaro is a software tool for identifying and removing the vector from raw DNA sequence data without prior knowledge of the vector sequence.  By statistically modeling short oligonucleotide frequencies within a set of reads, Figaro is able to determine which DNA words are most likely associated with vector sequence.  For a description of Figaro's algorithms please see our paper.  You may download Figaro individually, or as part of the AMOS package at Sourceforge.       

Revision as of 17:52, 9 July 2009

Overview

FigaroLogo.png


Figaro is a software tool for identifying and removing the vector from raw DNA sequence data without prior knowledge of the vector sequence. By statistically modeling short oligonucleotide frequencies within a set of reads, Figaro is able to determine which DNA words are most likely associated with vector sequence. For a description of Figaro's algorithms please see our paper. You may download Figaro individually, or as part of the AMOS package at Sourceforge.


Full information available at: http://amos.sourceforge.net/Figaro/Figaro.html