Bambus.details
From AMOS WIKI
Scaffold scaff_18 5 contigs 64636 bases 64636 span contig_asm_2 (5213, 22162) ====> v:9 l:2 o:0 ====> contig_asm_5 (22162, 28307) Valid: library lib_small: TBCNK26.y1 16239 16820 ---> ... 3947 ... <--- 2618 3237 TBCNK26.x1 TBCNH87.y1 14734 14845 ---> ... 2921 ... <--- 531 706 TBCNH87.x1 TBCNJ31.y1 15359 15868 ---> ... 3490 ... <--- 1293 1900 TBCNJ31.x1 TBCNA83.x1 15183 15932 ---> ... 3926 ... <--- 1538 2160 TBCNA83.y1 TBCNE82.y1 14504 15190 ---> ... 3207 ... <--- 88 762 TBCNE82.x1 TBCNE88.y1 15172 15873 ---> ... 3100 ... <--- 696 1323 TBCNE88.x1 TBCNE51.y1 16146 16714 ---> ... 3241 ... <--- 1869 2438 TBCNE51.x1 TBCNJ09.y1 14994 15564 ---> ... 3955 ... <--- 1456 2000 TBCNJ09.x1 TBCNH70.y1 16303 16724 ---> ... 3084 ... <--- 1813 2438 TBCNH70.x1 Invalid length: library lib_small: TBCNA14.y1 16141 16485 ---> ... 6077 ... <--- 4546 5269 TBCNA14.x1 TBCNH07.y1 14391 14909 ---> ... 4031 ... <--- 965 1473 TBCNH07.x1 contig_asm_1 (28307, 53330) ====> v:7 l:1 o:0 ====> contig_asm_7 (53330, 64636) Valid: library lib_small: TBCNJ68.y1 24459 25001 ---> ... 2843 ... <--- 1738 2279 TBCNJ68.x1 TBCNA75.y1 24098 24409 ---> ... 2845 ... <--- 1188 1920 TBCNA75.x1 TBCNC26.x1 22953 23550 ---> ... 3033 ... <--- 326 963 TBCNC26.y1 TBCNG35.y1 24291 24959 ---> ... 3104 ... <--- 1724 2372 TBCNG35.x1 TBCNC76.y1 23725 24381 ---> ... 2450 ... <--- 580 1152 TBCNC76.x1 TBCNE22.x1 23185 23399 ---> ... 2400 ... <--- 1 562 TBCNE22.y1 TBCNG17.y1 23920 24376 ---> ... 2920 ... <--- 1327 1817 TBCNG17.x1 Invalid length: library lib_small: TBCNH53.x1 22624 23166 ---> ... 5179 ... <--- 2185 2780 TBCNH53.y1 contig_asm_10 (0, 5213) ====> v:14 l:5 o:0 ====> contig_asm_2 (5213, 22162) Valid: library lib_small: TBCNJ44.x1 4216 4738 ---> ... 3358 ... <--- 1849 2361 TBCNJ44.y1 TBCNH74.y1 2962 3100 ---> ... 3723 ... <--- 1019 1472 TBCNH74.x1 TBCNL46.x1 3733 3870 ---> ... 3793 ... <--- 2089 2313 TBCNL46.y1 TBCNA92.y1 2113 2322 ---> ... 3900 ... <--- 177 800 TBCNA92.x1 TBCNB42.y1 4574 5143 ---> ... 3950 ... <--- 2633 3311 TBCNB42.x1 TBCNB75.x1 2356 2902 ---> ... 3598 ... <--- 190 741 TBCNB75.y1 TBCNC49.y1 2274 2944 ---> ... 3648 ... <--- 30 709 TBCNC49.x1 TBCNG02.x1 3054 3425 ---> ... 3728 ... <--- 1192 1569 TBCNG02.y1 TBCNF65.y1 3037 3651 ---> ... 3590 ... <--- 796 1414 TBCNF65.x1 TBCNG40.y1 4600 5061 ---> ... 3545 ... <--- 2325 2932 TBCNG40.x1 TBCNG44.y1 2903 3442 ---> ... 3761 ... <--- 814 1451 TBCNG44.x1 TBCNF82.x1 3028 3566 ---> ... 3989 ... <--- 1149 1804 TBCNF82.y1 TBCNG56.y1 4216 4726 ---> ... 3678 ... <--- 2029 2681 TBCNG56.x1 TBCNK11.x1 3544 4282 ---> ... 3314 ... <--- 1054 1645 TBCNK11.y1 Invalid length: library lib_small: TBCNK23.y1 2584 3306 ---> ... 4326 ... <--- 984 1697 TBCNK23.x1 TBCNK27.y1 4028 4658 ---> ... 4187 ... <--- 2319 3002 TBCNK27.x1 TBCNB15.x1 4407 4958 ---> ... 4501 ... <--- 3109 3695 TBCNB15.y1 TBCNH21.x1 2274 2853 ---> ... 4396 ... <--- 963 1457 TBCNH21.y1 TBCNF85.x1 1199 1816 ---> ... 4702 ... <--- 9 688 TBCNF85.y1 contig_asm_5 (22162, 28307) ====> v:11 l:0 o:0 ====> contig_asm_1 (28307, 53330) Valid: library lib_small: TBCNA10.x1 5391 5948 ---> ... 3080 ... <--- 2006 2326 TBCNA10.y1 TBCNJ56.y1 3578 4202 ---> ... 3434 ... <--- 338 867 TBCNJ56.x1 TBCNJ57.x1 5515 6078 ---> ... 2845 ... <--- 1586 2215 TBCNJ57.y1 TBCNK32.x1 4434 5164 ---> ... 2914 ... <--- 445 1203 TBCNK32.y1 TBCNL09.x1 4035 4814 ---> ... 3148 ... <--- 280 1038 TBCNL09.y1 TBCNC27.y1 4949 5588 ---> ... 3018 ... <--- 1360 1822 TBCNC27.x1 TBCNG69.x1 5030 5439 ---> ... 2895 ... <--- 1477 1780 TBCNG69.y1 TBCNH10.x1 4306 4832 ---> ... 2978 ... <--- 664 1139 TBCNH10.y1 TBCNH12.y1 5131 5621 ---> ... 2785 ... <--- 1170 1771 TBCNH12.x1 TBCNF40.y1 4374 4943 ---> ... 3321 ... <--- 1058 1550 TBCNF40.x1 TBCNF86.x1 5290 5815 ---> ... 2677 ... <--- 1263 1822 TBCNF86.y1 Scaffold scaff_16 5 contigs 40247 bases 40247 span contig_asm_8 (0, 3939) ====> v:19 l:1 o:0 <==== contig_asm_4 (3939, 19334) Valid: library lib_small: TBCNI55.y1 3240 3825 ---> ... 3820 ... <--- 12274 12866 TBCNI55.x1 TBCNA23.y1 2666 2792 ---> ... 2999 ... <--- 13669 14384 TBCNA23.x1 TBCNK42.x1 1515 2079 ---> ... 3702 ... <--- 14117 14688 TBCNK42.y1 TBCNJ79.x1 2470 3133 ---> ... 3164 ... <--- 13700 14302 TBCNJ79.y1 TBCNA93.x1 2549 3196 ---> ... 2758 ... <--- 14027 14522 TBCNA93.y1 TBCNA51.x1 3219 3864 ---> ... 3708 ... <--- 12407 12806 TBCNA51.y1 TBCNB25.x1 1438 1652 ---> ... 3122 ... <--- 14774 15366 TBCNB25.y1 TBCNE35.x1 1242 1682 ---> ... 3662 ... <--- 14430 15070 TBCNE35.y1 TBCNL61.x1 3325 3937 ---> ... 2912 ... <--- 13097 13673 TBCNL61.y1 TBCNF52.x1 3422 3890 ---> ... 2905 ... <--- 13007 13663 TBCNF52.y1 TBCNC28.x1 1932 2526 ---> ... 3645 ... <--- 13757 14384 TBCNC28.y1 TBCNI14.x1 2374 2835 ---> ... 2949 ... <--- 14011 14460 TBCNI14.y1 TBCNF72.y1 3336 3937 ---> ... 2780 ... <--- 13218 13767 TBCNF72.x1 TBCNG74.x1 2042 2512 ---> ... 2845 ... <--- 14447 14921 TBCNG74.y1 TBCNH28.x1 3452 3908 ---> ... 3368 ... <--- 12514 13002 TBCNH28.y1 TBCNJ04.y1 3271 3675 ---> ... 3893 ... <--- 12170 12663 TBCNJ04.x1 TBCNI07.x1 2051 2543 ---> ... 3043 ... <--- 14240 14757 TBCNI07.y1 TBCNJ10.x1 2151 2699 ---> ... 3775 ... <--- 13408 13938 TBCNJ10.y1 TBCNJ42.y1 2458 3097 ---> ... 3757 ... <--- 13119 13721 TBCNJ42.x1 Invalid length: library lib_small: TBCNG04.x1 3422 3909 ---> ... 4009 ... <--- 11903 12437 TBCNG04.y1 contig_asm_6 (19334, 36694) ====> v:7 l:0 o:0 ====> contig_asm_11 (38251, 40247) Valid: library lib_small: TBCNJ21.x1 16554 17133 ---> ... 3860 ... <--- 964 1497 TBCNJ21.y1 TBCNB30.y1 16447 17129 ---> ... 3077 ... <--- 1 607 TBCNB30.x1 TBCNL76.x1 16301 16976 ---> ... 3919 ... <--- 659 1303 TBCNL76.y1 TBCNC17.x1 16637 17261 ---> ... 3980 ... <--- 1170 1700 TBCNC17.y1 TBCNL85.y1 16352 16784 ---> ... 3727 ... <--- 632 1162 TBCNL85.x1 TBCNF14.x1 15892 16492 ---> ... 3858 ... <--- 362 833 TBCNF14.y1 TBCNJ01.x1 16622 16932 ---> ... 3427 ... <--- 783 1132 TBCNJ01.y1 contig_asm_4 (3939, 19334) <==== v:6 l:0 o:0 ====> contig_asm_6 (19334, 36694) Valid: library lib_small: TBCNL01.y1 649 1232 ---> ... 3306 ... <--- 1510 2074 TBCNL01.x1 TBCNK77.y1 118 789 ---> ... 3242 ... <--- 1749 2453 TBCNK77.x1 TBCNE36.y1 1303 1955 ---> ... 3324 ... <--- 701 1369 TBCNE36.x1 TBCNG24.x1 806 1481 ---> ... 2651 ... <--- 512 1170 TBCNG24.y1 TBCNE58.y1 649 1295 ---> ... 3406 ... <--- 1543 2111 TBCNE58.x1 TBCNF71.x1 655 1299 ---> ... 2663 ... <--- 698 1364 TBCNF71.y1 contig_asm_6 (19334, 36694) ====> v:7 l:0 o:0 ====> contig_asm_13 (36694, 38251) Valid: library lib_small: TBCNK28.x1 14485 15131 ---> ... 3527 ... <--- 67 652 TBCNK28.y1 TBCNK66.y1 14510 15129 ---> ... 3519 ... <--- 1 669 TBCNK66.x1 TBCNL88.x1 15527 16181 ---> ... 3374 ... <--- 898 1541 TBCNL88.y1 TBCNE78.x1 15723 16245 ---> ... 2886 ... <--- 628 1249 TBCNE78.y1 TBCNB85.x1 14363 15006 ---> ... 3888 ... <--- 223 891 TBCNB85.y1 TBCNL66.x1 15846 16548 ---> ... 3024 ... <--- 810 1510 TBCNL66.y1 TBCNE93.x1 15902 16586 ---> ... 2852 ... <--- 821 1394 TBCNE93.y1 Scaffold scaff_14 2 contigs 36971 bases 36971 span contig_asm_9 (0, 9649) ====> v:15 l:4 o:0 ====> contig_asm_3 (9649, 36971) Valid: library lib_small: TBCNI86.y1 7445 7866 ---> ... 3606 ... <--- 924 1402 TBCNI86.x1 TBCNL10.y1 8442 9049 ---> ... 3044 ... <--- 1100 1837 TBCNL10.x1 TBCNA31.y1 8875 9305 ---> ... 3734 ... <--- 2210 2960 TBCNA31.x1 TBCNL72.y1 8773 9385 ---> ... 3206 ... <--- 1612 2330 TBCNL72.x1 TBCNC40.y1 8218 8873 ---> ... 3889 ... <--- 1960 2458 TBCNC40.x1 TBCNC45.x1 7255 7730 ---> ... 3433 ... <--- 529 1039 TBCNC45.y1 TBCNF05.x1 7332 7864 ---> ... 3469 ... <--- 529 1152 TBCNF05.y1 TBCNF09.y1 8740 9361 ---> ... 3237 ... <--- 1612 2328 TBCNF09.x1 TBCNC70.y1 6584 7263 ---> ... 3966 ... <--- 193 901 TBCNC70.x1 TBCNC73.y1 7958 8625 ---> ... 3341 ... <--- 976 1650 TBCNC73.x1 TBCNH15.y1 8985 9352 ---> ... 3410 ... <--- 2295 2746 TBCNH15.x1 TBCNI21.x1 8397 8935 ---> ... 3864 ... <--- 2048 2612 TBCNI21.y1 TBCNJ33.x1 8424 8974 ---> ... 3380 ... <--- 1538 2155 TBCNJ33.y1 TBCNG93.x1 8218 8847 ---> ... 3837 ... <--- 1768 2406 TBCNG93.y1 TBCNK10.y1 7534 8181 ---> ... 2885 ... <--- 1 770 TBCNK10.x1 Invalid length: library lib_small: TBCNH85.y1 8655 9049 ---> ... 4437 ... <--- 2863 3443 TBCNH85.x1 TBCNC84.y1 8063 8737 ---> ... 4198 ... <--- 1982 2612 TBCNC84.x1 TBCNE92.x1 6994 7459 ---> ... 4055 ... <--- 721 1400 TBCNE92.y1 TBCNI65.y1 5871 6454 ---> ... 4477 ... <--- 73 699 TBCNI65.x1 Scaffold scaff_15 1 contigs 7121 bases 7121 span Scaffold scaff_17 1 contigs 1239 bases 1239 span