Read_AMOS.hh File Reference

Header for Read_t. More...

#include "Sequence_AMOS.hh"
#include <vector>

Include dependency graph for Read_AMOS.hh:

This graph shows which files directly or indirectly include this file:

Go to the source code of this file.

Namespaces
namespace	AMOS
Classes
class	AMOS::Read_t
	A DNA sequencing read. More...
Defines
#define	__Read_AMOS_HH   1
Typedefs
typedef char	ReadType_t
Functions
std::ostream &	operator<< (std::ostream &o, Read_t &read)
	Dump read object to ostream.

---

Detailed Description

Header for Read_t.

Author:

Adam M Phillippy

Date:

06/18/2003

Definition in file Read_AMOS.hh.

---

Define Documentation

#define __Read_AMOS_HH   1

Definition at line 11 of file Read_AMOS.hh.

---

Typedef Documentation

typedef char AMOS::ReadType_t

Definition at line 21 of file Read_AMOS.hh. Referenced by AMOS::Read_t::getType(), and AMOS::Read_t::setType().

---

Function Documentation

ostream & AMOS::operator<< (  std::ostream &  o, Read_t &  read )

Dump read object to ostream. Definition at line 269 of file Read_AMOS.cc. References AMOS::Range_t::begin, AMOS::Range_t::end, AMOS::Read_t::getClearRange(), AMOS::Universal_t::getComment(), AMOS::IBankable_t::getIID(), AMOS::Sequence_t::getQualString(), AMOS::Sequence_t::getSeqString(), and AMOS::WrapString().

---